Hello Trammell,
Reading what you are trying. Have no idea what Qubes OS is... I apologize for my ignorance, but I am (fortunately) willing to learn. New OSes, new tricks, and this old dog (me) is still willing to learn new tricks (in other words, also learning experience for me)?! ;-)
So, since you are coming to dracut after all, I am suspecting that something with your initramfs is not quite right... It often happens to me with Linux distros I am using for HW/SoC testing (95% Fedora distro).
And this cot my eye (from Marek Marczykowski-Górecki):
Probably some module required for your baremetal fedora is missing in
initramfs. First of all, remove "quiet" option to receive more details.
If that's about missing module, you can regenerate initramfs:
0. Make sure you've copied modules from Qubes
(/lib/modules/4.1.13-9.pvops.qubes.x86_64)
1. Call "dracut -f /initramfs-4.1.13-9.pvops.qubes.x86_64.img
4.1.13-9.pvops.qubes.x86_64
Could help (you might search other options with the provided search pattern) ... :-)
Please, let us know.
Zoran